API

Contents:

• BNMPy.BMatrix
  • get_upstream_genes()
  • load_network_from_file()
  • load_network_from_string()
  • load_pbn_from_file()
  • load_pbn_from_string()
  • rename_nodes()
• BNMPy.booleanNetwork
  • BooleanNetwork
  • getDataFromFile()
  • getParametersFromFile()
  • getRandomInitialNodeValues()
  • getRandomParameters()
• BNMPy.build_bn_from_kg
  • all_boolean_combos()
  • load_signor_network()
  • merge_PBN_string()
• BNMPy.PBN
  • ProbabilisticBN
• BNMPy.vis
  • build_igraph()
  • build_igraph_pbn()
  • create_matplotlib_extension_visualization()
  • create_matplotlib_visualization()
  • extract_logic_rules_from_network()
  • read_logic_rules()
  • vis_compression()
  • vis_extension()
  • vis_network()
• BNMPy.steady_state
  • SteadyStateCalculator